No. words: 1286; after pruning: 1260


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:594)  571  0.00 0.17 0.00  BG274556Td01P052D11P027C101F1_043.ab1        1   595 (52)  C BG274556Td01P052D11P027C101R1_043.ab1   (43)   596     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BG274556Td01P052D11P027C101R1_043.ab1   639 
  506    BG274556Td01P052D11P027C101F1_043.ab1   462 
  514  C BG274556Td01P052D11P027C101R1_043.ab1   126 
  538    BG274556Td01P052D11P027C101F1_043.ab1   494 
  546  C BG274556Td01P052D11P027C101R1_043.ab1    94 
  586    BG274556Td01P052D11P027C101F1_043.ab1   542 
  630  C BG274556Td01P052D11P027C101R1_043.ab1    10 
  634    BG274556Td01P052D11P027C101F1_043.ab1   590 
Contig length: old 691, new 691

Contig length: old 691, new 691
New start: 0