No. words: 1284; after pruning: 1258


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.9 (1,1:594)  545  0.51 0.51 0.17  BG274556Td06P052D11P027C101F1_076.ab1        1   592 (40)  C BG274556Td06P052D11P027C101R1_076.ab1   (55)   597     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BG274556Td06P052D11P027C101R1_076.ab1   652 
   85    BG274556Td06P052D11P027C101F1_076.ab1    27 
  101  C BG274556Td06P052D11P027C101R1_076.ab1   552 
  109    BG274556Td06P052D11P027C101F1_076.ab1    51 
  141  C BG274556Td06P052D11P027C101R1_076.ab1   512 
  145    BG274556Td06P052D11P027C101F1_076.ab1    87 
  261  C BG274556Td06P052D11P027C101R1_076.ab1   392 
  265    BG274556Td06P052D11P027C101F1_076.ab1   207 
  369  C BG274556Td06P052D11P027C101R1_076.ab1   284 
  381    BG274556Td06P052D11P027C101F1_076.ab1   323 
  640  C BG274556Td06P052D11P027C101R1_076.ab1    14 
  644    BG274556Td06P052D11P027C101F1_076.ab1   586 
Contig length: old 689, new 690

Contig length: old 690, new 690
New start: 0