No. words: 1286; after pruning: 1260


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:592)  553  0.34 0.34 0.17  BG274556Td07P052D11P027C101F1_073.ab1        1   593 (50)  C BG274556Td07P052D11P027C101R1_073.ab1   (49)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BG274556Td07P052D11P027C101R1_073.ab1   643 
   67    BG274556Td07P052D11P027C101F1_073.ab1    16 
   75  C BG274556Td07P052D11P027C101R1_073.ab1   569 
   79    BG274556Td07P052D11P027C101F1_073.ab1    28 
   95  C BG274556Td07P052D11P027C101R1_073.ab1   549 
  107    BG274556Td07P052D11P027C101F1_073.ab1    56 
  123  C BG274556Td07P052D11P027C101R1_073.ab1   521 
  127    BG274556Td07P052D11P027C101F1_073.ab1    76 
  135  C BG274556Td07P052D11P027C101R1_073.ab1   509 
  139    BG274556Td07P052D11P027C101F1_073.ab1    88 
  147  C BG274556Td07P052D11P027C101R1_073.ab1   497 
  163    BG274556Td07P052D11P027C101F1_073.ab1   112 
  251  C BG274556Td07P052D11P027C101R1_073.ab1   393 
  263    BG274556Td07P052D11P027C101F1_073.ab1   212 
  327  C BG274556Td07P052D11P027C101R1_073.ab1   317 
  331    BG274556Td07P052D11P027C101F1_073.ab1   280 
  363  C BG274556Td07P052D11P027C101R1_073.ab1   281 
  367    BG274556Td07P052D11P027C101F1_073.ab1   316 
  634  C BG274556Td07P052D11P027C101R1_073.ab1    11 
  638    BG274556Td07P052D11P027C101F1_073.ab1   587 
Contig length: old 693, new 694

Contig length: old 694, new 694
New start: 0