No. words: 1454; after pruning: 1410


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:722)  647  1.16 0.00 0.00  BG274556Tu01P027C04P027C101F1_015.ab1        1   692 (0)  C BG274556Tu01P027C04P027C101R1_015.ab1   (39)   723    32 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BG274556Tu01P027C04P027C101R1_015.ab1   762 
   55    BG274556Tu01P027C04P027C101F1_015.ab1    16 
   63  C BG274556Tu01P027C04P027C101R1_015.ab1   700 
   71    BG274556Tu01P027C04P027C101F1_015.ab1    32 
  107  C BG274556Tu01P027C04P027C101R1_015.ab1   656 
  111    BG274556Tu01P027C04P027C101F1_015.ab1    72 
  123  C BG274556Tu01P027C04P027C101R1_015.ab1   640 
Contig length: old 762, new 762

Contig length: old 762, new 762
New start: 0