No. words: 1209; after pruning: 1169


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:717)  424  1.11 0.00 0.00  BG274556Tu02P027C04P027C101F1_013.ab1        1   449 (0)  C BG274556Tu02P027C04P027C101R1_013.ab1   (42)   718   270 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BG274556Tu02P027C04P027C101R1_013.ab1   760 
   55    BG274556Tu02P027C04P027C101F1_013.ab1    13 
   59  C BG274556Tu02P027C04P027C101R1_013.ab1   702 
   67    BG274556Tu02P027C04P027C101F1_013.ab1    25 
  145  C BG274556Tu02P027C04P027C101R1_013.ab1   616 
  149    BG274556Tu02P027C04P027C101F1_013.ab1   107 
  181  C BG274556Tu02P027C04P027C101R1_013.ab1   580 
Contig length: old 760, new 760

Contig length: old 760, new 760
New start: 0