No. words: 1142; after pruning: 1116


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.4 (1,1:536)  504  0.00 0.19 0.19  BG274853Sn25P068G05P019H071F1_035.ab1        4   537 (39)  C BG274853Sn25P068G05P019H071R1_035.ab1   (32)   534     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BG274853Sn25P068G05P019H071R1_035.ab1   566 
   56    BG274853Sn25P068G05P019H071F1_035.ab1    26 
   64  C BG274853Sn25P068G05P019H071R1_035.ab1   503 
   68    BG274853Sn25P068G05P019H071F1_035.ab1    38 
   76  C BG274853Sn25P068G05P019H071R1_035.ab1   491 
   80    BG274853Sn25P068G05P019H071F1_035.ab1    50 
   84  C BG274853Sn25P068G05P019H071R1_035.ab1   483 
  168    BG274853Sn25P068G05P019H071F1_035.ab1   138 
  200  C BG274853Sn25P068G05P019H071R1_035.ab1   367 
  228    BG274853Sn25P068G05P019H071F1_035.ab1   198 
  236  C BG274853Sn25P068G05P019H071R1_035.ab1   331 
  292    BG274853Sn25P068G05P019H071F1_035.ab1   262 
  304  C BG274853Sn25P068G05P019H071R1_035.ab1   263 
  312    BG274853Sn25P068G05P019H071F1_035.ab1   282 
  348  C BG274853Sn25P068G05P019H071R1_035.ab1   219 
  356    BG274853Sn25P068G05P019H071F1_035.ab1   326 
  364  C BG274853Sn25P068G05P019H071R1_035.ab1   203 
  404    BG274853Sn25P068G05P019H071F1_035.ab1   374 
  408  C BG274853Sn25P068G05P019H071R1_035.ab1   159 
  424    BG274853Sn25P068G05P019H071F1_035.ab1   394 
  428  C BG274853Sn25P068G05P019H071R1_035.ab1   139 
  440    BG274853Sn25P068G05P019H071F1_035.ab1   410 
  448  C BG274853Sn25P068G05P019H071R1_035.ab1   119 
  452    BG274853Sn25P068G05P019H071F1_035.ab1   422 
  456  C BG274853Sn25P068G05P019H071R1_035.ab1   111 
  480    BG274853Sn25P068G05P019H071F1_035.ab1   450 
  484  C BG274853Sn25P068G05P019H071R1_035.ab1    83 
  524    BG274853Sn25P068G05P019H071F1_035.ab1   494 
Contig length: old 605, new 606

Contig length: old 606, new 606
New start: 0