No. words: 1126; after pruning: 1100


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.7 (1,1:531)  501  0.00 0.19 0.19  BG274853Sn28P068G05P019H071F1_046.ab1        3   532 (31)  C BG274853Sn28P068G05P019H071R1_046.ab1   (33)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Sn28P068G05P019H071R1_046.ab1   563 
  441    BG274853Sn28P068G05P019H071F1_046.ab1   409 
  445  C BG274853Sn28P068G05P019H071R1_046.ab1   119 
  477    BG274853Sn28P068G05P019H071F1_046.ab1   445 
  485  C BG274853Sn28P068G05P019H071R1_046.ab1    79 
  489    BG274853Sn28P068G05P019H071F1_046.ab1   457 
  493  C BG274853Sn28P068G05P019H071R1_046.ab1    71 
  513    BG274853Sn28P068G05P019H071F1_046.ab1   481 
Contig length: old 594, new 595

Contig length: old 595, new 595
New start: 0