No. words: 1136; after pruning: 1110


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 6.9 (1,1:531)  501  0.00 0.19 0.19  BG274853Sn29P068G05P019H071F1_044.ab1        3   532 (37)  C BG274853Sn29P068G05P019H071R1_044.ab1   (37)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Sn29P068G05P019H071R1_044.ab1   567 
   61    BG274853Sn29P068G05P019H071F1_044.ab1    25 
   65  C BG274853Sn29P068G05P019H071R1_044.ab1   503 
  233    BG274853Sn29P068G05P019H071F1_044.ab1   197 
  241  C BG274853Sn29P068G05P019H071R1_044.ab1   327 
  277    BG274853Sn29P068G05P019H071F1_044.ab1   241 
  281  C BG274853Sn29P068G05P019H071R1_044.ab1   287 
  357    BG274853Sn29P068G05P019H071F1_044.ab1   321 
  365  C BG274853Sn29P068G05P019H071R1_044.ab1   203 
  433    BG274853Sn29P068G05P019H071F1_044.ab1   397 
  437  C BG274853Sn29P068G05P019H071R1_044.ab1   131 
  477    BG274853Sn29P068G05P019H071F1_044.ab1   441 
  489  C BG274853Sn29P068G05P019H071R1_044.ab1    79 
  493    BG274853Sn29P068G05P019H071F1_044.ab1   457 
  497  C BG274853Sn29P068G05P019H071R1_044.ab1    71 
  517    BG274853Sn29P068G05P019H071F1_044.ab1   481 
Contig length: old 604, new 605

Contig length: old 605, new 605
New start: 0