No. words: 1138; after pruning: 1112


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.7 (1,1:530)  501  0.00 0.19 0.19  BG274853Sn30P068G05P019H071F1_042.ab1        2   531 (40)  C BG274853Sn30P068G05P019H071R1_042.ab1   (37)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Sn30P068G05P019H071R1_042.ab1   567 
  425    BG274853Sn30P068G05P019H071F1_042.ab1   388 
  429  C BG274853Sn30P068G05P019H071R1_042.ab1   139 
  433    BG274853Sn30P068G05P019H071F1_042.ab1   396 
  437  C BG274853Sn30P068G05P019H071R1_042.ab1   131 
  481    BG274853Sn30P068G05P019H071F1_042.ab1   444 
  485  C BG274853Sn30P068G05P019H071R1_042.ab1    83 
  493    BG274853Sn30P068G05P019H071F1_042.ab1   456 
  497  C BG274853Sn30P068G05P019H071R1_042.ab1    71 
  525    BG274853Sn30P068G05P019H071F1_042.ab1   488 
Contig length: old 607, new 608

Contig length: old 608, new 608
New start: 0