No. words: 1140; after pruning: 1114


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.7 (1,1:531)  501  0.00 0.19 0.19  BG274853Sn31P068G05P019H071F1_040.ab1        3   532 (40)  C BG274853Sn31P068G05P019H071R1_040.ab1   (38)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Sn31P068G05P019H071R1_040.ab1   568 
  290    BG274853Sn31P068G05P019H071F1_040.ab1   253 
  294  C BG274853Sn31P068G05P019H071R1_040.ab1   275 
  422    BG274853Sn31P068G05P019H071F1_040.ab1   385 
  430  C BG274853Sn31P068G05P019H071R1_040.ab1   139 
  482    BG274853Sn31P068G05P019H071F1_040.ab1   445 
  490  C BG274853Sn31P068G05P019H071R1_040.ab1    79 
  494    BG274853Sn31P068G05P019H071F1_040.ab1   457 
  498  C BG274853Sn31P068G05P019H071R1_040.ab1    71 
  514    BG274853Sn31P068G05P019H071F1_040.ab1   477 
Contig length: old 608, new 609

Contig length: old 609, new 609
New start: 0