No. words: 1141; after pruning: 1115


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.4 (1,1:533)  501  0.00 0.19 0.19  BG274853Sn32P068G05P019H071F1_038.ab1        4   534 (39)  C BG274853Sn32P068G05P019H071R1_038.ab1   (37)   531     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Sn32P068G05P019H071R1_038.ab1   568 
   85    BG274853Sn32P068G05P019H071F1_038.ab1    50 
   89  C BG274853Sn32P068G05P019H071R1_038.ab1   480 
  233    BG274853Sn32P068G05P019H071F1_038.ab1   198 
  241  C BG274853Sn32P068G05P019H071R1_038.ab1   328 
  317    BG274853Sn32P068G05P019H071F1_038.ab1   282 
  345  C BG274853Sn32P068G05P019H071R1_038.ab1   224 
  357    BG274853Sn32P068G05P019H071F1_038.ab1   322 
  365  C BG274853Sn32P068G05P019H071R1_038.ab1   204 
  425    BG274853Sn32P068G05P019H071F1_038.ab1   390 
  429  C BG274853Sn32P068G05P019H071R1_038.ab1   140 
  481    BG274853Sn32P068G05P019H071F1_038.ab1   446 
  489  C BG274853Sn32P068G05P019H071R1_038.ab1    80 
  493    BG274853Sn32P068G05P019H071F1_038.ab1   458 
  497  C BG274853Sn32P068G05P019H071R1_038.ab1    72 
  513    BG274853Sn32P068G05P019H071F1_038.ab1   478 
  529  C BG274853Sn32P068G05P019H071R1_038.ab1    40 
  533    BG274853Sn32P068G05P019H071F1_038.ab1   498 
  537  C BG274853Sn32P068G05P019H071R1_038.ab1    32 
  541    BG274853Sn32P068G05P019H071F1_038.ab1   506 
Contig length: old 607, new 608

Contig length: old 608, new 608
New start: 0