No. words: 1131; after pruning: 1105


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.9 (1,1:531)  495  0.38 0.19 0.19  BG274853Ta14P068G05P019H071F1_026.ab1        3   532 (37)  C BG274853Ta14P068G05P019H071R1_026.ab1   (32)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BG274853Ta14P068G05P019H071R1_026.ab1   562 
  476    BG274853Ta14P068G05P019H071F1_026.ab1   445 
  484  C BG274853Ta14P068G05P019H071R1_026.ab1    79 
  512    BG274853Ta14P068G05P019H071F1_026.ab1   481 
Contig length: old 599, new 600

Contig length: old 600, new 600
New start: 0