No. words: 1139; after pruning: 1113


Histogram of relative pair offsets, for read pairs with multiple alignments:
49     2
51     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.3 (1,1:537)  502  0.19 0.19 0.19  BG274853Ta18P068G05P019H071F1_018.ab1        4   538 (34)  C BG274853Ta18P068G05P019H071R1_018.ab1   (32)   535     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274853Ta18P068G05P019H071R1_018.ab1   567 
  352    BG274853Ta18P068G05P019H071F1_018.ab1   322 
  360  C BG274853Ta18P068G05P019H071R1_018.ab1   208 
  476    BG274853Ta18P068G05P019H071F1_018.ab1   446 
Contig length: old 601, new 602

Contig length: old 602, new 602
New start: 0