No. words: 1410; after pruning: 1384


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.7 (1,1:609)  578  0.17 0.00 0.17  BG313152Ln02P003E05E111F1_10.ab1        1   606 (99)  C BG313152Ln02P003E05E111R1_10.ab1   (96)   609     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BG313152Ln02P003E05E111R1_10.ab1   705 
  104    BG313152Ln02P003E05E111F1_10.ab1     8 
  328  C BG313152Ln02P003E05E111R1_10.ab1   378 
  352    BG313152Ln02P003E05E111F1_10.ab1   256 
  388  C BG313152Ln02P003E05E111R1_10.ab1   318 
  408    BG313152Ln02P003E05E111F1_10.ab1   312 
  524  C BG313152Ln02P003E05E111R1_10.ab1   182 
  684    BG313152Ln02P003E05E111F1_10.ab1   588 
Contig length: old 800, new 801

Contig length: old 801, new 801
New start: 0