No. words: 1434; after pruning: 1408


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.5 (1,1:626)  586  0.16 0.32 0.16  BG313152Ln05P003E05E111F1_09.ab1        1   624 (82)  C BG313152Ln05P003E05E111R1_09.ab1   (100)   628     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BG313152Ln05P003E05E111R1_09.ab1   728 
  122    BG313152Ln05P003E05E111F1_09.ab1    20 
  350  C BG313152Ln05P003E05E111R1_09.ab1   379 
  370    BG313152Ln05P003E05E111F1_09.ab1   268 
  554  C BG313152Ln05P003E05E111R1_09.ab1   175 
  698    BG313152Ln05P003E05E111F1_09.ab1   596 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0