No. words: 1412; after pruning: 1386


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 10.9 (1,1:607)  565  0.17 0.00 0.17  BG313152Ln07P003E05E111F1_09.ab1       12   606 (92)  C BG313152Ln07P003E05E111R1_09.ab1   (118)   596     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BG313152Ln07P003E05E111R1_09.ab1   714 
  122    BG313152Ln07P003E05E111F1_09.ab1    15 
  354  C BG313152Ln07P003E05E111R1_09.ab1   361 
  358    BG313152Ln07P003E05E111F1_09.ab1   251 
  394  C BG313152Ln07P003E05E111R1_09.ab1   321 
  418    BG313152Ln07P003E05E111F1_09.ab1   311 
  562  C BG313152Ln07P003E05E111R1_09.ab1   153 
  578    BG313152Ln07P003E05E111F1_09.ab1   471 
  582  C BG313152Ln07P003E05E111R1_09.ab1   133 
  686    BG313152Ln07P003E05E111F1_09.ab1   579 
  690  C BG313152Ln07P003E05E111R1_09.ab1    25 
  694    BG313152Ln07P003E05E111F1_09.ab1   587 
Contig length: old 804, new 805

Contig length: old 805, new 805
New start: 0