No. words: 1433; after pruning: 1407


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 10.4 (1,1:625)  586  0.00 0.00 0.32  BG313152Ln08P003E05E111F1_10.ab1        5   621 (82)  C BG313152Ln08P003E05E111R1_10.ab1   (110)   620     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BG313152Ln08P003E05E111R1_10.ab1   730 
  124    BG313152Ln08P003E05E111F1_10.ab1    19 
  368  C BG313152Ln08P003E05E111R1_10.ab1   363 
  376    BG313152Ln08P003E05E111F1_10.ab1   271 
  412  C BG313152Ln08P003E05E111R1_10.ab1   319 
  432    BG313152Ln08P003E05E111F1_10.ab1   327 
  468  C BG313152Ln08P003E05E111R1_10.ab1   263 
  592    BG313152Ln08P003E05E111F1_10.ab1   487 
  596  C BG313152Ln08P003E05E111R1_10.ab1   135 
  700    BG313152Ln08P003E05E111F1_10.ab1   595 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0