No. words: 923; after pruning: 897


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:295)  274  0.00 0.00 1.01  BG313611Ld01P078F06P078F121F1_085.ab1        1   298 (146)  C BG313611Ld01P078F06P078F121R1_085.ab1   (184)   295     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BG313611Ld01P078F06P078F121R1_085.ab1   479 
  232    BG313611Ld01P078F06P078F121F1_085.ab1    48 
  236  C BG313611Ld01P078F06P078F121R1_085.ab1   244 
  276    BG313611Ld01P078F06P078F121F1_085.ab1    92 
  280  C BG313611Ld01P078F06P078F121R1_085.ab1   200 
  368    BG313611Ld01P078F06P078F121F1_085.ab1   184 
  384  C BG313611Ld01P078F06P078F121R1_085.ab1    96 
  388    BG313611Ld01P078F06P078F121F1_085.ab1   204 
Contig length: old 627, new 628

Contig length: old 628, new 628
New start: 0