No. words: 922; after pruning: 896


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:283)  279  0.00 0.00 0.00  BG313611Ld08P078F06P078F121F1_086.ab1        1   284 (163)  C BG313611Ld08P078F06P078F121R1_086.ab1   (191)   284     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BG313611Ld08P078F06P078F121R1_086.ab1   475 
  377    BG313611Ld08P078F06P078F121F1_086.ab1   186 
  405  C BG313611Ld08P078F06P078F121R1_086.ab1    71 
  409    BG313611Ld08P078F06P078F121F1_086.ab1   218 
Contig length: old 638, new 638

Contig length: old 638, new 638
New start: 0