No. words: 1229; after pruning: 1203


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:650)  543  0.00 0.17 0.35  BG313636Tu01P081H02P081H081F1_065.ab1        7   585 (0)  C BG313636Tu01P081H02P081H081R1_065.ab1   (0)   644    67 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1    BG313636Tu01P081H02P081H081F1_065.ab1     1 
  252  C BG313636Tu01P081H02P081H081R1_065.ab1   400 
  268    BG313636Tu01P081H02P081H081F1_065.ab1   268 
  336  C BG313636Tu01P081H02P081H081R1_065.ab1   316 
  352    BG313636Tu01P081H02P081H081F1_065.ab1   352 
  368  C BG313636Tu01P081H02P081H081R1_065.ab1   284 
  388    BG313636Tu01P081H02P081H081F1_065.ab1   388 
  392  C BG313636Tu01P081H02P081H081R1_065.ab1   260 
  416    BG313636Tu01P081H02P081H081F1_065.ab1   416 
  420  C BG313636Tu01P081H02P081H081R1_065.ab1   232 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0