No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:559)  549  0.00 0.18 0.00  BG313722Sn25P059E08P078H121F1_023.ab1        1   560 (35)  C BG313722Sn25P059E08P078H121R1_023.ab1   (23)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BG313722Sn25P059E08P078H121R1_023.ab1   584 
   57    BG313722Sn25P059E08P078H121F1_023.ab1    33 
   65  C BG313722Sn25P059E08P078H121R1_023.ab1   520 
   73    BG313722Sn25P059E08P078H121F1_023.ab1    49 
   81  C BG313722Sn25P059E08P078H121R1_023.ab1   504 
   85    BG313722Sn25P059E08P078H121F1_023.ab1    61 
  113  C BG313722Sn25P059E08P078H121R1_023.ab1   472 
  129    BG313722Sn25P059E08P078H121F1_023.ab1   105 
  185  C BG313722Sn25P059E08P078H121R1_023.ab1   400 
  269    BG313722Sn25P059E08P078H121F1_023.ab1   245 
  277  C BG313722Sn25P059E08P078H121R1_023.ab1   308 
  457    BG313722Sn25P059E08P078H121F1_023.ab1   433 
  501  C BG313722Sn25P059E08P078H121R1_023.ab1    84 
  557    BG313722Sn25P059E08P078H121F1_023.ab1   533 
Contig length: old 619, new 619

Contig length: old 619, new 619
New start: 0