No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:489)  476  0.00 0.20 0.00  BG313722Sn30P088C11P078H121F1_084.ab1        1   490 (51)  C BG313722Sn30P088C11P078H121R1_084.ab1   (47)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BG313722Sn30P088C11P078H121R1_084.ab1   538 
  117    BG313722Sn30P088C11P078H121F1_084.ab1    69 
  121  C BG313722Sn30P088C11P078H121R1_084.ab1   418 
  317    BG313722Sn30P088C11P078H121F1_084.ab1   269 
Contig length: old 589, new 589

Contig length: old 589, new 589
New start: 0