No. words: 1197; after pruning: 1171


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:562)  552  0.00 0.18 0.00  BG313722Sn31P059E08P078H121F1_017.ab1        1   563 (37)  C BG313722Sn31P059E08P078H121R1_017.ab1   (33)   564     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BG313722Sn31P059E08P078H121R1_017.ab1   597 
   71    BG313722Sn31P059E08P078H121F1_017.ab1    37 
   87  C BG313722Sn31P059E08P078H121R1_017.ab1   511 
   95    BG313722Sn31P059E08P078H121F1_017.ab1    61 
  107  C BG313722Sn31P059E08P078H121R1_017.ab1   491 
  111    BG313722Sn31P059E08P078H121F1_017.ab1    77 
  151  C BG313722Sn31P059E08P078H121R1_017.ab1   447 
  159    BG313722Sn31P059E08P078H121F1_017.ab1   125 
  191  C BG313722Sn31P059E08P078H121R1_017.ab1   407 
  487    BG313722Sn31P059E08P078H121F1_017.ab1   453 
  511  C BG313722Sn31P059E08P078H121R1_017.ab1    87 
  567    BG313722Sn31P059E08P078H121F1_017.ab1   533 
Contig length: old 634, new 634

Contig length: old 634, new 634
New start: 0