No. words: 1181; after pruning: 1141


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:561)  550  0.18 0.18 0.00  BG313722Ta15P059E08P078H121F1_001.ab1        1   562 (33)  C BG313722Ta15P059E08P078H121R1_001.ab1   (23)   563     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BG313722Ta15P059E08P078H121R1_001.ab1   586 
   37    BG313722Ta15P059E08P078H121F1_001.ab1    13 
   45  C BG313722Ta15P059E08P078H121R1_001.ab1   542 
   57    BG313722Ta15P059E08P078H121F1_001.ab1    33 
   69  C BG313722Ta15P059E08P078H121R1_001.ab1   518 
   73    BG313722Ta15P059E08P078H121F1_001.ab1    49 
   96  C BG313722Ta15P059E08P078H121R1_001.ab1   491 
  100    BG313722Ta15P059E08P078H121F1_001.ab1    76 
  116  C BG313722Ta15P059E08P078H121R1_001.ab1   471 
  120    BG313722Ta15P059E08P078H121F1_001.ab1    96 
  124  C BG313722Ta15P059E08P078H121R1_001.ab1   463 
  128    BG313722Ta15P059E08P078H121F1_001.ab1   104 
  184  C BG313722Ta15P059E08P078H121R1_001.ab1   403 
  476    BG313722Ta15P059E08P078H121F1_001.ab1   452 
  488  C BG313722Ta15P059E08P078H121R1_001.ab1    99 
  492    BG313722Ta15P059E08P078H121F1_001.ab1   468 
  500  C BG313722Ta15P059E08P078H121R1_001.ab1    87 
  560    BG313722Ta15P059E08P078H121F1_001.ab1   536 
  564  C BG313722Ta15P059E08P078H121R1_001.ab1    23 
  568    BG313722Ta15P059E08P078H121F1_001.ab1   544 
Contig length: old 619, new 619

Contig length: old 619, new 619
New start: 0