No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:489)  471  0.00 0.41 0.00  BG313722Ta15P088C11P078H121F1_065.ab1        1   489 (52)  C BG313722Ta15P088C11P078H121R1_065.ab1   (47)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BG313722Ta15P088C11P078H121R1_065.ab1   538 
  396    BG313722Ta15P088C11P078H121F1_065.ab1   347 
Contig length: old 589, new 590

Contig length: old 590, new 590
New start: 0