No. words: 1179; after pruning: 1139


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:559)  548  0.18 0.18 0.00  BG313722Ta16P059E08P078H121F1_002.ab1        1   560 (35)  C BG313722Ta16P059E08P078H121R1_002.ab1   (23)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BG313722Ta16P059E08P078H121R1_002.ab1   584 
   57    BG313722Ta16P059E08P078H121F1_002.ab1    33 
   88  C BG313722Ta16P059E08P078H121R1_002.ab1   497 
   92    BG313722Ta16P059E08P078H121F1_002.ab1    68 
  112  C BG313722Ta16P059E08P078H121R1_002.ab1   473 
  124    BG313722Ta16P059E08P078H121F1_002.ab1   100 
  180  C BG313722Ta16P059E08P078H121R1_002.ab1   405 
  428    BG313722Ta16P059E08P078H121F1_002.ab1   404 
  488  C BG313722Ta16P059E08P078H121R1_002.ab1    97 
  492    BG313722Ta16P059E08P078H121F1_002.ab1   468 
  500  C BG313722Ta16P059E08P078H121R1_002.ab1    85 
  556    BG313722Ta16P059E08P078H121F1_002.ab1   532 
Contig length: old 619, new 619

Contig length: old 619, new 619
New start: 0