No. words: 1170; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:550)  540  0.00 0.18 0.00  BG313722Ta17P059E08P078H121F1_031.ab1        1   551 (44)  C BG313722Ta17P059E08P078H121R1_031.ab1   (23)   552     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BG313722Ta17P059E08P078H121R1_031.ab1   575 
   57    BG313722Ta17P059E08P078H121F1_031.ab1    33 
   77  C BG313722Ta17P059E08P078H121R1_031.ab1   499 
   85    BG313722Ta17P059E08P078H121F1_031.ab1    61 
  113  C BG313722Ta17P059E08P078H121R1_031.ab1   463 
  133    BG313722Ta17P059E08P078H121F1_031.ab1   109 
  169  C BG313722Ta17P059E08P078H121R1_031.ab1   407 
  457    BG313722Ta17P059E08P078H121F1_031.ab1   433 
  505  C BG313722Ta17P059E08P078H121R1_031.ab1    71 
  541    BG313722Ta17P059E08P078H121F1_031.ab1   517 
  545  C BG313722Ta17P059E08P078H121R1_031.ab1    31 
  557    BG313722Ta17P059E08P078H121F1_031.ab1   533 
Contig length: old 619, new 619

Contig length: old 619, new 619
New start: 0