No. words: 1185; after pruning: 1159


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:559)  549  0.00 0.18 0.00  BG313722Ta20P059E08P078H121F1_030.ab1        1   560 (41)  C BG313722Ta20P059E08P078H121R1_030.ab1   (23)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BG313722Ta20P059E08P078H121R1_030.ab1   584 
   57    BG313722Ta20P059E08P078H121F1_030.ab1    33 
   69  C BG313722Ta20P059E08P078H121R1_030.ab1   516 
   85    BG313722Ta20P059E08P078H121F1_030.ab1    61 
  105  C BG313722Ta20P059E08P078H121R1_030.ab1   480 
  417    BG313722Ta20P059E08P078H121F1_030.ab1   393 
  421  C BG313722Ta20P059E08P078H121R1_030.ab1   164 
  437    BG313722Ta20P059E08P078H121F1_030.ab1   413 
  445  C BG313722Ta20P059E08P078H121R1_030.ab1   140 
  473    BG313722Ta20P059E08P078H121F1_030.ab1   449 
  485  C BG313722Ta20P059E08P078H121R1_030.ab1   100 
  497    BG313722Ta20P059E08P078H121F1_030.ab1   473 
  505  C BG313722Ta20P059E08P078H121R1_030.ab1    80 
  533    BG313722Ta20P059E08P078H121F1_030.ab1   509 
  537  C BG313722Ta20P059E08P078H121R1_030.ab1    48 
  541    BG313722Ta20P059E08P078H121F1_030.ab1   517 
  545  C BG313722Ta20P059E08P078H121R1_030.ab1    40 
  549    BG313722Ta20P059E08P078H121F1_030.ab1   525 
  557  C BG313722Ta20P059E08P078H121R1_030.ab1    28 
  569    BG313722Ta20P059E08P078H121F1_030.ab1   545 
Contig length: old 625, new 625

Contig length: old 625, new 625
New start: 0