No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.3 (1,1:480)  463  0.00 0.21 0.00  BG313722Ta21P088C11P078H121F1_091.ab1        3   481 (53)  C BG313722Ta21P088C11P078H121R1_091.ab1   (57)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BG313722Ta21P088C11P078H121R1_091.ab1   537 
  316    BG313722Ta21P088C11P078H121F1_091.ab1   260 
Contig length: old 590, new 590

Contig length: old 590, new 590
New start: 0