No. words: 1175; after pruning: 1149


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:550)  534  0.36 0.18 0.00  BG313722Ta22P059E08P078H121F1_028.ab1        1   551 (49)  C BG313722Ta22P059E08P078H121R1_028.ab1   (23)   552     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BG313722Ta22P059E08P078H121R1_028.ab1   575 
   57    BG313722Ta22P059E08P078H121F1_028.ab1    33 
   69  C BG313722Ta22P059E08P078H121R1_028.ab1   507 
   83    BG313722Ta22P059E08P078H121F1_028.ab1    59 
  115  C BG313722Ta22P059E08P078H121R1_028.ab1   461 
  447    BG313722Ta22P059E08P078H121F1_028.ab1   423 
  507  C BG313722Ta22P059E08P078H121R1_028.ab1    69 
  539    BG313722Ta22P059E08P078H121F1_028.ab1   515 
  547  C BG313722Ta22P059E08P078H121R1_028.ab1    29 
  559    BG313722Ta22P059E08P078H121F1_028.ab1   535 
Contig length: old 624, new 624

Contig length: old 624, new 624
New start: 0