No. words: 1170; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:550)  540  0.00 0.18 0.00  BG313722Ta24P059E08P078H121F1_026.ab1        1   551 (44)  C BG313722Ta24P059E08P078H121R1_026.ab1   (23)   552     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BG313722Ta24P059E08P078H121R1_026.ab1   575 
   57    BG313722Ta24P059E08P078H121F1_026.ab1    33 
   69  C BG313722Ta24P059E08P078H121R1_026.ab1   507 
   81    BG313722Ta24P059E08P078H121F1_026.ab1    57 
  105  C BG313722Ta24P059E08P078H121R1_026.ab1   471 
  109    BG313722Ta24P059E08P078H121F1_026.ab1    85 
  113  C BG313722Ta24P059E08P078H121R1_026.ab1   463 
  445    BG313722Ta24P059E08P078H121F1_026.ab1   421 
  505  C BG313722Ta24P059E08P078H121R1_026.ab1    71 
  529    BG313722Ta24P059E08P078H121F1_026.ab1   505 
Contig length: old 619, new 619

Contig length: old 619, new 619
New start: 0