No. words: 1048; after pruning: 1022 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 3 0.0 9.3 (1,1:486) 465 0.21 0.21 0.00 BG313722Td09P088C11P078H121F1_071.ab1 4 486 (51) C BG313722Td09P088C11P078H121R1_071.ab1 (27) 484 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 3 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 236 nodes 120 str. conn. components Path 1 C BG313722Td09P088C11P078H121R1_071.ab1 511 45 BG313722Td09P088C11P078H121F1_071.ab1 20 61 C BG313722Td09P088C11P078H121R1_071.ab1 451 65 BG313722Td09P088C11P078H121F1_071.ab1 40 69 C BG313722Td09P088C11P078H121R1_071.ab1 443 77 BG313722Td09P088C11P078H121F1_071.ab1 52 85 C BG313722Td09P088C11P078H121R1_071.ab1 427 89 BG313722Td09P088C11P078H121F1_071.ab1 64 97 C BG313722Td09P088C11P078H121R1_071.ab1 415 101 BG313722Td09P088C11P078H121F1_071.ab1 76 109 C BG313722Td09P088C11P078H121R1_071.ab1 403 113 BG313722Td09P088C11P078H121F1_071.ab1 88 145 C BG313722Td09P088C11P078H121R1_071.ab1 367 205 BG313722Td09P088C11P078H121F1_071.ab1 180 Contig length: old 561, new 562 Contig length: old 562, new 561 New start: 0 S Change at: 31; seg lengths: entry 1, contig 1 D Change at: 44; seg lengths: entry 0, contig 1