No. words: 1818; after pruning: 1766


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      4

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:-6)  585  0.33 0.17 0.00  BG314283As01P081A03P081A091R1_066.ab1        1   606 (0)    BG314283As01P081A03P081A091R1_091.ab1        7   613 (88) *
Merge:(0)    0    0.0 5.4 (1,1:4)  245  0.40 0.00 0.00  BG314283As01P081A03P081A091F1_066.ab1        5   254 (0)    BG314283As01P081A03P081A091F1_091.ab1        1   250 (7) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    2

Chimera merges: 


Contig 2:  296 nodes

 150 str. conn. components

Path
    1    BG314283As01P081A03P081A091R1_091.ab1     1 
   18    BG314283As01P081A03P081A091R1_066.ab1    12 
   22    BG314283As01P081A03P081A091R1_091.ab1    22 
   26    BG314283As01P081A03P081A091R1_066.ab1    20 
   39    BG314283As01P081A03P081A091R1_091.ab1    39 
   67    BG314283As01P081A03P081A091R1_066.ab1    61 
   71    BG314283As01P081A03P081A091R1_091.ab1    71 
  131    BG314283As01P081A03P081A091R1_066.ab1   125 
  135    BG314283As01P081A03P081A091R1_091.ab1   135 
Contig length: old 701, new 701

Contig 1:  122 nodes

 63 str. conn. components

Path
    1    BG314283As01P081A03P081A091F1_066.ab1     1 
    8    BG314283As01P081A03P081A091F1_091.ab1     4 
   12    BG314283As01P081A03P081A091F1_066.ab1    12 
   20    BG314283As01P081A03P081A091F1_091.ab1    16 
   28    BG314283As01P081A03P081A091F1_066.ab1    28 
   59    BG314283As01P081A03P081A091F1_091.ab1    55 
   63    BG314283As01P081A03P081A091F1_066.ab1    63 
   71    BG314283As01P081A03P081A091F1_091.ab1    67 
   75    BG314283As01P081A03P081A091F1_066.ab1    75 
   87    BG314283As01P081A03P081A091F1_091.ab1    83 
  111    BG314283As01P081A03P081A091F1_066.ab1   111 
  115    BG314283As01P081A03P081A091F1_091.ab1   111 
Contig length: old 261, new 261

Contig length: old 701, new 701
New start: 0 

Contig length: old 261, new 261
New start: 0