No. words: 1132; after pruning: 1106


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:401)  394  0.25 0.25 0.00  BG314548Ld01P081B03P081B091F1_028.ab1        1   402 (176)  C BG314548Ld01P081B03P081B091R1_028.ab1   (151)   403     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1  C BG314548Ld01P081B03P081B091R1_028.ab1   554 
  406    BG314548Ld01P081B03P081B091F1_028.ab1   254 
Contig length: old 730, new 730

Contig length: old 730, new 730
New start: 0