No. words: 945; after pruning: 919


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:406)  351  2.82 0.00 0.26  BG314548Ld16P081B03P081B091F1_042.ab1        1   390 (0)  C BG314548Ld16P081B03P081B091R1_042.ab1   (149)   406    18 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C BG314548Ld16P081B03P081B091R1_042.ab1   555 
Contig length: old 555, new 555

Contig length: old 555, new 555
New start: 0