No. words: 1290; after pruning: 1236


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:688)  546  0.83 0.67 0.50  BG314551As02P081C03P081C091F1_086.ab1        8   607 (0)  C BG314551As02P081C03P081C091R1_086.ab1   (0)   683    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    BG314551As02P081C03P081C091F1_086.ab1     1 
  312  C BG314551As02P081C03P081C091R1_086.ab1   379 
  324    BG314551As02P081C03P081C091F1_086.ab1   324 
  376  C BG314551As02P081C03P081C091R1_086.ab1   315 
  380    BG314551As02P081C03P081C091F1_086.ab1   380 
  408  C BG314551As02P081C03P081C091R1_086.ab1   283 
Contig length: old 689, new 690

Contig length: old 690, new 690
New start: 0