No. words: 696; after pruning: 670


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:290)  283  0.00 0.34 0.00  BG314551Sn25P081C03P115G041F1_033.ab1        1   291 (63)  C BG314551Sn25P081C03P115G041R1_033.ab1   (50)   292     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  146 nodes

 75 str. conn. components

Path
    1  C BG314551Sn25P081C03P115G041R1_033.ab1   342 
  235    BG314551Sn25P081C03P115G041F1_033.ab1   184 
  239  C BG314551Sn25P081C03P115G041R1_033.ab1   104 
  255    BG314551Sn25P081C03P115G041F1_033.ab1   204 
  279  C BG314551Sn25P081C03P115G041R1_033.ab1    64 
  295    BG314551Sn25P081C03P115G041F1_033.ab1   244 
  303  C BG314551Sn25P081C03P115G041R1_033.ab1    40 
  311    BG314551Sn25P081C03P115G041F1_033.ab1   260 
Contig length: old 405, new 405

Contig length: old 405, new 405
New start: 0