No. words: 1431; after pruning: 1405


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:696)  669  0.00 0.14 0.00  BG314551Tu01P081C03P081C091F1_092.ab1        1   690 (0)  C BG314551Tu01P081C03P081C091R1_092.ab1   (43)   698     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C BG314551Tu01P081C03P081C091R1_092.ab1   741 
   48    BG314551Tu01P081C03P081C091F1_092.ab1     5 
   52  C BG314551Tu01P081C03P081C091R1_092.ab1   690 
   65    BG314551Tu01P081C03P081C091F1_092.ab1    21 
  249  C BG314551Tu01P081C03P081C091R1_092.ab1   493 
  253    BG314551Tu01P081C03P081C091F1_092.ab1   209 
  277  C BG314551Tu01P081C03P081C091R1_092.ab1   465 
  281    BG314551Tu01P081C03P081C091F1_092.ab1   237 
  409  C BG314551Tu01P081C03P081C091R1_092.ab1   333 
  413    BG314551Tu01P081C03P081C091F1_092.ab1   369 
  417  C BG314551Tu01P081C03P081C091R1_092.ab1   325 
  421    BG314551Tu01P081C03P081C091F1_092.ab1   377 
  461  C BG314551Tu01P081C03P081C091R1_092.ab1   281 
  465    BG314551Tu01P081C03P081C091F1_092.ab1   421 
  469  C BG314551Tu01P081C03P081C091R1_092.ab1   273 
  473    BG314551Tu01P081C03P081C091F1_092.ab1   429 
  485  C BG314551Tu01P081C03P081C091R1_092.ab1   257 
  493    BG314551Tu01P081C03P081C091F1_092.ab1   449 
  537  C BG314551Tu01P081C03P081C091R1_092.ab1   205 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0