No. words: 1009; after pruning: 983


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.3 (1,1:331)  318  0.00 0.00 0.61  BG604501Ld08P027H04P027H101F1_037.ab1        1   329 (156)  C BG604501Ld08P027H04P027H101R1_037.ab1   (193)   331     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C BG604501Ld08P027H04P027H101R1_037.ab1   524 
  357    BG604501Ld08P027H04P027H101F1_037.ab1   164 
  365  C BG604501Ld08P027H04P027H101R1_037.ab1   160 
  417    BG604501Ld08P027H04P027H101F1_037.ab1   224 
  425  C BG604501Ld08P027H04P027H101R1_037.ab1   100 
  429    BG604501Ld08P027H04P027H101F1_037.ab1   236 
  437  C BG604501Ld08P027H04P027H101R1_037.ab1    88 
  441    BG604501Ld08P027H04P027H101F1_037.ab1   248 
Contig length: old 677, new 678

Contig length: old 678, new 678
New start: 0