No. words: 274; after pruning: 248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -1.0 -1.0 (1,1:87)   66  1.20 1.20 2.41  BG604501Sn25P059C09P027H101F1_065.ab1        1    83 (56)  C BG604501Sn25P059C09P027H101R1_065.ab1   (47)    88     7 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1  C BG604501Sn25P059C09P027H101R1_065.ab1   135 
   86    BG604501Sn25P059C09P027H101F1_065.ab1    38 
Contig length: old 186, new 187

Contig length: old 187, new 187
New start: 0