No. words: 271; after pruning: 245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -0.2 -0.2 (1,1:84)   72  0.00 0.00 1.30  BG604501Ta12P059C09P027H101F1_080.ab1        4    80 (56)  C BG604501Ta12P059C09P027H101R1_080.ab1   (54)    81     6 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  36 nodes

 20 str. conn. components

Path
    1  C BG604501Ta12P059C09P027H101R1_080.ab1   135 
   86    BG604501Ta12P059C09P027H101F1_080.ab1    35 
Contig length: old 186, new 187

Contig length: old 187, new 187
New start: 0