No. words: 1078; after pruning: 1052


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.5 (1,1:494)  483  0.00 0.00 0.00  BG604577At02P027A05P027A111F1_044.ab1        3   495 (50)  C BG604577At02P027A05P027A111R1_044.ab1   (40)   493     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BG604577At02P027A05P027A111R1_044.ab1   533 
  124    BG604577At02P027A05P027A111F1_044.ab1    86 
  128  C BG604577At02P027A05P027A111R1_044.ab1   406 
  436    BG604577At02P027A05P027A111F1_044.ab1   398 
Contig length: old 583, new 583

Contig length: old 583, new 583
New start: 0