No. words: 1333; after pruning: 1307


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:512)  493  0.19 0.19 0.19  BG604577Ld02P027A05P027A111F1_046.ab1        1   513 (172)  C BG604577Ld02P027A05P027A111R1_046.ab1   (135)   513     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BG604577Ld02P027A05P027A111R1_046.ab1   648 
  329    BG604577Ld02P027A05P027A111F1_046.ab1   193 
  340  C BG604577Ld02P027A05P027A111R1_046.ab1   309 
  480    BG604577Ld02P027A05P027A111F1_046.ab1   344 
  496  C BG604577Ld02P027A05P027A111R1_046.ab1   153 
  504    BG604577Ld02P027A05P027A111F1_046.ab1   368 
  508  C BG604577Ld02P027A05P027A111R1_046.ab1   141 
  516    BG604577Ld02P027A05P027A111F1_046.ab1   380 
  532  C BG604577Ld02P027A05P027A111R1_046.ab1   117 
  544    BG604577Ld02P027A05P027A111F1_046.ab1   408 
  628  C BG604577Ld02P027A05P027A111R1_046.ab1    21 
  632    BG604577Ld02P027A05P027A111F1_046.ab1   496 
Contig length: old 820, new 821

Contig length: old 821, new 821
New start: 0