No. words: 1345; after pruning: 1319


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:513)  496  0.00 0.19 0.19  BG604577Ld08P027A05P027A111F1_034.ab1        1   514 (180)  C BG604577Ld08P027A05P027A111R1_034.ab1   (137)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BG604577Ld08P027A05P027A111R1_034.ab1   651 
  243    BG604577Ld08P027A05P027A111F1_034.ab1   105 
  247  C BG604577Ld08P027A05P027A111R1_034.ab1   405 
  295    BG604577Ld08P027A05P027A111F1_034.ab1   157 
  299  C BG604577Ld08P027A05P027A111R1_034.ab1   353 
  307    BG604577Ld08P027A05P027A111F1_034.ab1   169 
  331  C BG604577Ld08P027A05P027A111R1_034.ab1   321 
  339    BG604577Ld08P027A05P027A111F1_034.ab1   201 
  351  C BG604577Ld08P027A05P027A111R1_034.ab1   301 
  495    BG604577Ld08P027A05P027A111F1_034.ab1   357 
  507  C BG604577Ld08P027A05P027A111R1_034.ab1   145 
  515    BG604577Ld08P027A05P027A111F1_034.ab1   377 
  539  C BG604577Ld08P027A05P027A111R1_034.ab1   113 
  547    BG604577Ld08P027A05P027A111F1_034.ab1   409 
  563  C BG604577Ld08P027A05P027A111R1_034.ab1    89 
  567    BG604577Ld08P027A05P027A111F1_034.ab1   429 
Contig length: old 831, new 832

Contig length: old 832, new 832
New start: 0