No. words: 1078; after pruning: 1052


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.6 (1,1:508)  491  0.00 0.00 0.20  BG604577Tu01P027A05P027A111F1_011.ab1        3   509 (36)  C BG604577Tu01P027A05P027A111R1_011.ab1   (27)   506     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BG604577Tu01P027A05P027A111R1_011.ab1   533 
  139    BG604577Tu01P027A05P027A111F1_011.ab1   114 
  151  C BG604577Tu01P027A05P027A111R1_011.ab1   383 
  207    BG604577Tu01P027A05P027A111F1_011.ab1   182 
  215  C BG604577Tu01P027A05P027A111R1_011.ab1   319 
  235    BG604577Tu01P027A05P027A111F1_011.ab1   210 
  247  C BG604577Tu01P027A05P027A111R1_011.ab1   287 
  291    BG604577Tu01P027A05P027A111F1_011.ab1   266 
  303  C BG604577Tu01P027A05P027A111R1_011.ab1   231 
  315    BG604577Tu01P027A05P027A111F1_011.ab1   290 
  355  C BG604577Tu01P027A05P027A111R1_011.ab1   179 
  367    BG604577Tu01P027A05P027A111F1_011.ab1   342 
  411  C BG604577Tu01P027A05P027A111R1_011.ab1   123 
  431    BG604577Tu01P027A05P027A111F1_011.ab1   406 
  439  C BG604577Tu01P027A05P027A111R1_011.ab1    95 
  459    BG604577Tu01P027A05P027A111F1_011.ab1   434 
  467  C BG604577Tu01P027A05P027A111R1_011.ab1    67 
  491    BG604577Tu01P027A05P027A111F1_011.ab1   466 
Contig length: old 569, new 570

Contig length: old 570, new 570
New start: 0