No. words: 761; after pruning: 735


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:218)  212  0.00 0.00 0.00  BG604859Ld14P081D03P081D091F1_016.ab1        1   219 (180)  C BG604859Ld14P081D03P081D091R1_016.ab1   (143)   219     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  112 nodes

 58 str. conn. components

Path
    1  C BG604859Ld14P081D03P081D091R1_016.ab1   362 
  219    BG604859Ld14P081D03P081D091F1_016.ab1    76 
  223  C BG604859Ld14P081D03P081D091R1_016.ab1   140 
  243    BG604859Ld14P081D03P081D091F1_016.ab1   100 
  251  C BG604859Ld14P081D03P081D091R1_016.ab1   112 
  303    BG604859Ld14P081D03P081D091F1_016.ab1   160 
Contig length: old 542, new 542

Contig length: old 542, new 542
New start: 0