No. words: 1625; after pruning: 1599


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:969)  642  0.00 0.15 0.00  BG606095Ld16P081F03P081F091F1_029.ab1      133   786 (0)  C BG606095Ld16P081F03P081F091R1_029.ab1   (0)   839   185 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    BG606095Ld16P081F03P081F091F1_029.ab1     1 
  172  C BG606095Ld16P081F03P081F091R1_029.ab1   800 
  176    BG606095Ld16P081F03P081F091F1_029.ab1   176 
  388  C BG606095Ld16P081F03P081F091R1_029.ab1   584 
  396    BG606095Ld16P081F03P081F091F1_029.ab1   396 
  456  C BG606095Ld16P081F03P081F091R1_029.ab1   516 
  460    BG606095Ld16P081F03P081F091F1_029.ab1   460 
  480  C BG606095Ld16P081F03P081F091R1_029.ab1   492 
  496    BG606095Ld16P081F03P081F091F1_029.ab1   496 
  508  C BG606095Ld16P081F03P081F091R1_029.ab1   464 
  560    BG606095Ld16P081F03P081F091F1_029.ab1   560 
  564  C BG606095Ld16P081F03P081F091R1_029.ab1   408 
  772    BG606095Ld16P081F03P081F091F1_029.ab1   771 
  776  C BG606095Ld16P081F03P081F091R1_029.ab1   196 
Contig length: old 970, new 971

Contig length: old 971, new 971
New start: 0