No. words: 1657; after pruning: 1631


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:1102)  542  0.18 0.00 0.18  BG606095Ld21P081F03P081F091F1_049.ab1      273   827 (0)  C BG606095Ld21P081F03P081F091R1_049.ab1   (0)   830   277 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    BG606095Ld21P081F03P081F091F1_049.ab1     1 
  535  C BG606095Ld21P081F03P081F091R1_049.ab1   569 
  551    BG606095Ld21P081F03P081F091F1_049.ab1   551 
  567  C BG606095Ld21P081F03P081F091R1_049.ab1   537 
Contig length: old 1103, new 1103

Contig length: old 1103, new 1103
New start: 0