No. words: 1277; after pruning: 1251


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.5 (1,1:588)  571  0.17 0.00 0.17  BG606644At01P027B05P027B111F1_091.ab1        5   589 (53)  C BG606644At01P027B05P027B111R1_091.ab1   (51)   584     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BG606644At01P027B05P027B111R1_091.ab1   635 
   83    BG606644At01P027B05P027B111F1_091.ab1    36 
  107  C BG606644At01P027B05P027B111R1_091.ab1   529 
  115    BG606644At01P027B05P027B111F1_091.ab1    68 
  131  C BG606644At01P027B05P027B111R1_091.ab1   505 
  143    BG606644At01P027B05P027B111F1_091.ab1    96 
  151  C BG606644At01P027B05P027B111R1_091.ab1   485 
  159    BG606644At01P027B05P027B111F1_091.ab1   112 
Contig length: old 688, new 689

Contig length: old 689, new 689
New start: 0