No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:591)  577  0.00 0.17 0.17  BG606644At02P027B05P027B111F1_092.ab1        1   592 (51)  C BG606644At02P027B05P027B111R1_092.ab1   (43)   592     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BG606644At02P027B05P027B111R1_092.ab1   635 
   67    BG606644At02P027B05P027B111F1_092.ab1    23 
   71  C BG606644At02P027B05P027B111R1_092.ab1   565 
   75    BG606644At02P027B05P027B111F1_092.ab1    31 
  107  C BG606644At02P027B05P027B111R1_092.ab1   529 
  111    BG606644At02P027B05P027B111F1_092.ab1    67 
  131  C BG606644At02P027B05P027B111R1_092.ab1   505 
  139    BG606644At02P027B05P027B111F1_092.ab1    95 
  155  C BG606644At02P027B05P027B111R1_092.ab1   481 
  159    BG606644At02P027B05P027B111F1_092.ab1   115 
  615  C BG606644At02P027B05P027B111R1_092.ab1    21 
  619    BG606644At02P027B05P027B111F1_092.ab1   575 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0